chemtool-proper

maintainer ConnorBehan · 3 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The source is a tarball from a university-hosted personal page, which is not on a standard code forge but plausibly the original developer's official site; it is a standard source tarball for a known software, built locally with patches, and no untrusted executables or remote code execution occur.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-2507) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The source is a tarball from a university-hosted personal page, which is not on a standard code forge but plausibly the original developer's official site; it is a standard source tarball for a known software, built locally with patches, and no untrusted executables or remote code execution occur.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:14 source=(http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-$pkgver.tar.gz

PKGBUILD

1 offending line(s) highlighted

      1# Contributor: Connor Behan <connor.behan@gmail.com>
    
      2
    
      3pkgname=chemtool-proper
    
      4pkgver=1.6.14
    
      5pkgrel=3
    
      6pkgdesc="Chemtool ported to Gtk3 with assistance from Codex"
    
      7arch=(i686 x86_64)
    
      8license=('GPL2')
    
      9url="http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool.html"
    
      10depends=('gtk3')
    
      11replaces=('chemtool')
    
      12provides=('chemtool')
    
      13options=(!libtool)
    
      14source=(http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-$pkgver.tar.gz
    
      15        0001-Add-GTK3-compatibility-drawing-layer.patch
    
      16        0002-Port-chemtool-sources-to-GTK3.patch
    
      17        gtk3_build_system.patch
    
      18        chemtool.desktop)
    
      19
    
      20prepare() {
    
      21  cd "$srcdir"/chemtool-$pkgver
    
      22  patch -Np1 -i ../gtk3_build_system.patch
    
      23  patch -Np2 -i ../0001-Add-GTK3-compatibility-drawing-layer.patch
    
      24  patch -Np2 -i ../0002-Port-chemtool-sources-to-GTK3.patch
    
      25  ./autogen.sh
    
      26}
    
      27
    
      28build() {
    
      29  cd "$srcdir"/chemtool-$pkgver
    
      30  CFLAGS+=' -fcommon' # https://wiki.gentoo.org/wiki/Gcc_10_porting_notes/fno_common
    
      31  ./configure --prefix=/usr --mandir=/usr/share/man
    
      32  make
    
      33}
    
      34
    
      35package() {
    
      36  cd "$srcdir"/chemtool-$pkgver
    
      37  make DESTDIR="$pkgdir" install
    
      38  install -D -m644 gnome/chemtool.png "$pkgdir"/usr/share/pixmaps/chemtool.png
    
      39  install -D -m644 "$srcdir"/chemtool.desktop "$pkgdir"/usr/share/applications/chemtool.desktop
    
      40}
    
      41
    
      42sha256sums=('86161a0461386b334a5ffb17cdf094a491941884678272f45749813514ddafcb'
    
      43            'b7278a7256ef5c2cfc6ede8e9d577cae662d9e107a3d29b152122f499ffa68b9'
    
      44            'a81ffc0a44b4c856a2633eefcb9d0aced2695c5de0f7bbcb99ba952665a9a8ff'
    
      45            '5cfb774056a88c6e7dcd52233c740a27e592208292e9471e565b86832ec99e16'
    
      46            '9c35347faa7aa664c012f0d66fffbd469c4f2f3f8f24e5dd0cd42d554e9c5ac7')
    
      47

Changes since previous scan

--- PKGBUILD @ 2026-07-22 00:29
+++ PKGBUILD @ 2026-08-03 00:08
@@ -2,20 +2,31 @@
 
 pkgname=chemtool-proper
 pkgver=1.6.14
-pkgrel=2
-pkgdesc="Chemtool without the stupid right justified help menu"
+pkgrel=3
+pkgdesc="Chemtool ported to Gtk3 with assistance from Codex"
 arch=(i686 x86_64)
 license=('GPL2')
 url="http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool.html"
-depends=('gtk2')
+depends=('gtk3')
 replaces=('chemtool')
 provides=('chemtool')
 options=(!libtool)
-source=(http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-$pkgver.tar.gz chemtool.desktop)
+source=(http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-$pkgver.tar.gz
+        0001-Add-GTK3-compatibility-drawing-layer.patch
+        0002-Port-chemtool-sources-to-GTK3.patch
+        gtk3_build_system.patch
+        chemtool.desktop)
+
+prepare() {
+  cd "$srcdir"/chemtool-$pkgver
+  patch -Np1 -i ../gtk3_build_system.patch
+  patch -Np2 -i ../0001-Add-GTK3-compatibility-drawing-layer.patch
+  patch -Np2 -i ../0002-Port-chemtool-sources-to-GTK3.patch
+  ./autogen.sh
+}
 
 build() {
   cd "$srcdir"/chemtool-$pkgver
-  sed -i -e 's/.*right_justify.*//g' main.c
   CFLAGS+=' -fcommon' # https://wiki.gentoo.org/wiki/Gcc_10_porting_notes/fno_common
   ./configure --prefix=/usr --mandir=/usr/share/man
   make
@@ -28,6 +39,9 @@
   install -D -m644 "$srcdir"/chemtool.desktop "$pkgdir"/usr/share/applications/chemtool.desktop
 }
 
-md5sums=('3a97680f0abe1327af1f0072551a68e2'
-         '8cbb6f7021bd5aaa6f6a31fc4d95a06e')
+sha256sums=('86161a0461386b334a5ffb17cdf094a491941884678272f45749813514ddafcb'
+            'b7278a7256ef5c2cfc6ede8e9d577cae662d9e107a3d29b152122f499ffa68b9'
+            'a81ffc0a44b4c856a2633eefcb9d0aced2695c5de0f7bbcb99ba952665a9a8ff'
+            '5cfb774056a88c6e7dcd52233c740a27e592208292e9471e565b86832ec99e16'
+            '9c35347faa7aa664c012f0d66fffbd469c4f2f3f8f24e5dd0cd42d554e9c5ac7')
 

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 05:19:42	MEDIUM	1
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 00:17:08	LOW	2
2026-07-18 00:14:48	LOW	2
2026-07-17 00:06:16	LOW	2
2026-07-16 00:05:41	LOW	2