chromap

maintainer fc-ibb105 · 1 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The source is a compressed file hosted on a university-affiliated mirror (SUSTech), which is plausible for academic software distribution; the file is verified by a matching sha512sum, and chromap is built from its own source, which is normal AUR packaging practice despite the non-whitelisted host.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-07-25) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The source is a compressed file hosted on a university-affiliated mirror (SUSTech), which is plausible for academic software distribution; the file is verified by a matching sha512sum, and chromap is built from its own source, which is normal AUR packaging practice despite the non-whitelisted host.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:18 "https://mirrors.sustech.edu.cn/git/fc-ibb105/aur/-/raw/main/$xz_name"

PKGBUILD

1 offending line(s) highlighted

      1pkgname=chromap
    
      2chromap_ver=0.3.2
    
      3pkgver=$chromap_ver
    
      4pkgrel=1
    
      5pkgdesc="An ultrafast method for aligning and preprocessing high throughput chromatin profiles. "
    
      6arch=('x86_64')
    
      7license=('custom:"Copyright (c) 2019 Haowen Zhang, Li Song, X. Shirley Liu, Heng Li"')
    
      8url="https://haowenz.github.io/chromap/"
    
      9depends=()
    
      10provides=("$pkgname")
    
      11conflicts=("$pkgname")
    
      12optdepends=()
    
      13
    
      14file_name=${pkgname}-${pkgver}
    
      15xz_name=$file_name.xz
    
      16
    
      17source=(
    
      18	"https://mirrors.sustech.edu.cn/git/fc-ibb105/aur/-/raw/main/$xz_name"
    
      19)
    
      20
    
      21chromap_sum=489706456caceb5ed23b854429efd82c9dc6517992b3c9075aaffcfc3e7e8f8beb6cad2d6c7e07839057861b02787549be9d02e884c8397686141a81f1c214e9
    
      22sha512sums=(
    
      23	$chromap_sum
    
      24)
    
      25
    
      26package() {
    
      27	export LC_ALL=en_US.UTF-8
    
      28
    
      29	mkdir -p $pkgdir/usr/bin
    
      30	#xz -d $xz_name
    
      31	mv $file_name $pkgdir/usr/bin/$pkgname
    
      32	chmod 755 $pkgdir/usr/bin/$pkgname
    
      33}
    
      34

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 00:17:08	LOW	2
2026-07-18 00:14:48	LOW	2
2026-07-17 00:06:16	LOW	2
2026-07-16 00:05:41	LOW	2
2026-07-15 00:09:25	LOW	2