fastarg

LOW

maintainer imjiaoyuan 0 votes scanned 2026-10-08 16:09:18.783063

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

PKGBUILD

      1# Maintainer: imjiaoyuan <imjiaoyuan@gmail.com>
    
      2# Upstream tags nothing, so pkgver is the pinned commit's date and _tag carries
    
      3# the commit itself. The Perl helpers under utils/ convert between the file
    
      4# formats of various phasing/association tools and fastARG's own format.
    
      5
    
      6pkgname=fastarg
    
      7_tag=841b4971cdf33932f07044b1c6c2fb14000bdd94
    
      8pkgver=20161116
    
      9pkgrel=1
    
      10pkgdesc="Fast heuristic construction of ancestral recombination graphs"
    
      11arch=('x86_64')
    
      12url="https://github.com/lh3/fastARG"
    
      13license=('MIT')
    
      14depends=('glibc' 'perl' 'zlib')
    
      15source=("$pkgname-$pkgver.tar.gz::${url}/archive/${_tag}.tar.gz")
    
      16sha256sums=('980e4419a472f6185caff9384e656d17cd1fcaee11344443e32f045b64d1643f')
    
      17
    
      18build() {
    
      19    cd "$srcdir/fastARG-$_tag"
    
      20    make
    
      21}
    
      22
    
      23package() {
    
      24    cd "$srcdir/fastARG-$_tag"
    
      25    install -Dm755 fastARG "$pkgdir/usr/bin/fastARG"
    
      26    install -Dm755 fastARG.pl "$pkgdir/usr/bin/fastARG.pl"
    
      27    install -Dm755 phaseARG.pl "$pkgdir/usr/bin/phaseARG.pl"
    
      28    install -d "$pkgdir/usr/bin"
    
      29    install -m755 utils/*.pl "$pkgdir/usr/bin/"
    
      30    # upstream ships no LICENSE file; the grant is the MIT block in kseq.h
    
      31    awk 'NR==1,/^\*\//' kseq.h > LICENSE
    
      32    install -Dm644 LICENSE "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
    
      33}
    
      34

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2026-10-08 16:09:18	Low	1