freemol-svn

LOW

maintainer orphaned 0 votes scanned 2026-11-01 00:21:48.120785

View on AUR

Why flagged

The source is a Subversion checkout from the project's own domain (bioinformatics.org), which is plausibly the official project host; building from source is normal AUR packaging, even if the host is not on a standard whitelist.

Triggered rules

Low AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-07-25) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The source is a Subversion checkout from the project's own domain (bioinformatics.org), which is plausibly the official project host; building from source is normal AUR packaging, even if the host is not on a standard whitelist.

1 higher static finding superseded - not the current verdict (shown for transparency)

Medium source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:13 source=("$pkgname::svn://bioinformatics.org/svnroot/freemol/trunk"

PKGBUILD

1 offending line(s) highlighted

      1# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
    
      2
    
      3pkgname=freemol-svn
    
      4pkgver=r158
    
      5pkgrel=1
    
      6pkgdesc="FreeMOL is an assembly of free and open source programs forming a framework for computational chemistry, informatics, structural biology and graphics"
    
      7arch=(x86_64 i686)
    
      8url="http://www.bioinformatics.org/freemol"
    
      9license=('custom')
    
      10_pythonver=2.7
    
      11depends=("python2>=${_pythonver}")
    
      12makedepends=('svn' 'gcc' 'patch')
    
      13source=("$pkgname::svn://bioinformatics.org/svnroot/freemol/trunk"
    
      14        "freemol.patch"
    
      15        "freemol.sh")
    
      16md5sums=('SKIP'
    
      17         'edd96be3ae195bdf622a59aacb9e8bbd'
    
      18         '878093e656397ff192b39dcc8b41231f')
    
      19
    
      20pkgver() {
    
      21  cd "$pkgname"
    
      22  local ver="$(svnversion)"
    
      23  printf "r%s" "${ver//[[:alpha:]]}"
    
      24}
    
      25
    
      26prepare() {
    
      27    cd ${srcdir}/${pkgname}/src/mengine/src
    
      28
    
      29    patch -Np0 -i ${srcdir}/freemol.patch
    
      30}
    
      31
    
      32build() {
    
      33	cd ${srcdir}/${pkgname}/src/mengine/src
    
      34
    
      35    make
    
      36}
    
      37
    
      38package() {
    
      39	cd ${srcdir}/${pkgname}
    
      40
    
      41    mkdir -p ${pkgdir}/usr/lib/python${_pythonver}/site-packages/freemol
    
      42    install -Dm755 src/mengine/src/mengine ${pkgdir}/usr/bin/mengine
    
      43    install -Dm644 freemol/libpy/freemol/__init__.py ${pkgdir}/usr/lib/python${_pythonver}/site-packages/freemol/__init__.py
    
      44    install -Dm644 freemol/libpy/freemol/mengine.py ${pkgdir}/usr/lib/python${_pythonver}/site-packages/freemol/mengine.py
    
      45
    
      46    install -Dm644 ${srcdir}/freemol.sh ${pkgdir}/etc/profile.d/freemol.sh
    
      47}
    
      48

Scan history

Scanned at (UTC)	Severity	Rules
2026-11-01 00:21:48	Low	2
2026-10-31 00:07:41	Low	2
2026-10-30 00:29:30	Low	2
2026-10-29 00:13:55	Low	2
2026-10-28 00:06:54	Low	2
2026-10-27 00:23:28	Low	2
2026-10-26 00:12:40	Low	2
2026-10-25 00:20:48	Low	2
2026-10-24 00:14:55	Low	2
2026-10-23 00:02:19	Low	2
2026-10-22 00:13:10	Low	2
2026-10-21 00:12:50	Low	2
2026-10-20 00:10:31	Low	2
2026-10-19 00:03:55	Low	2
2026-10-18 00:06:55	Low	2
2026-10-17 00:21:55	Low	2
2026-10-16 00:12:47	Low	2
2026-10-15 00:28:05	Low	2
2026-10-14 00:06:47	Low	2
2026-10-13 00:23:45	Low	2