gencore

LOW

maintainer imjiaoyuan 0 votes scanned 2026-09-12 15:12:25.546860

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

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Low Few votes, recently uploaded zero_votes_recent

Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

PKGBUILD

      1# Maintainer: imjiaoyuan <imjiaoyuan@gmail.com>
    
      2
    
      3pkgname=gencore
    
      4pkgver=0.17.2
    
      5pkgrel=1
    
      6pkgdesc="Generate duplex/single consensus reads to reduce sequencing noise"
    
      7arch=('x86_64')
    
      8url="https://github.com/OpenGene/gencore"
    
      9license=('MIT')
    
      10options=('!strip' '!debug')
    
      11depends=('glibc' 'zlib' 'htslib')
    
      12source=("$pkgname-$pkgver.tar.gz::$url/archive/v$pkgver.tar.gz")
    
      13sha256sums=('f39f12c38670d93683a5f3f27306c56459a4fd19abcb1a9e3c732b229333aa51')
    
      14
    
      15build() {
    
      16    cd "$srcdir/gencore-$pkgver"
    
      17    # Headers live in ./src (the Makefile points at a nonexistent ./inc) and
    
      18    # the link line (-L. -lhts) resolves to the system htslib.
    
      19    make CFLAGS="-std=c++11 -O3 -I./src -I/usr/include"
    
      20}
    
      21
    
      22check() {
    
      23    cd "$srcdir/gencore-$pkgver"
    
      24    ./gencore --version
    
      25}
    
      26
    
      27package() {
    
      28    cd "$srcdir/gencore-$pkgver"
    
      29    install -Dm755 gencore "$pkgdir/usr/bin/gencore"
    
      30    install -Dm644 LICENSE "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
    
      31}
    
      32

Scan history

Scanned at (UTC)	Severity	Rules
2026-09-12 15:12:25	Low	1