kaks_calculator

maintainer Kiri0 · 0 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The source is downloaded from a plausible project-related academic host (ngdc.cncb.ac.cn) which is not whitelisted but is associated with a Chinese national center for bioinformation; the package builds binaries from source and installs them, which is normal for AUR packages, and the checksum is provided, reducing supply-chain risk.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-07-25) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The source is downloaded from a plausible project-related academic host (ngdc.cncb.ac.cn) which is not whitelisted but is associated with a Chinese national center for bioinformation; the package builds binaries from source and installs them, which is normal for AUR packages, and the checksum is provided, reducing supply-chain risk.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:14 source=("https://ngdc.cncb.ac.cn/biocode/tools/1/releases/${pkgver}/file/download?filename=${_pkgname}${pkgver}.zip")

PKGBUILD

1 offending line(s) highlighted

      1# Maintainer: kiri <kiri@vern.cc>
    
      2
    
      3pkgname=kaks_calculator
    
      4_pkgname=KaKs_Calculator
    
      5pkgver=3.0
    
      6pkgrel=2
    
      7pkgdesc="Calculating Selective Pressure on Coding and Non-coding Sequences. https://doi.org/10.1016/j.gpb.2021.12.002"
    
      8arch=('x86_64')
    
      9url="https://ngdc.cncb.ac.cn/biocode/tools/BT000001"
    
      10license=('custom')
    
      11depends=( 'glibc'
    
      12          'gcc-libs')
    
      13makedepends=('make')
    
      14source=("https://ngdc.cncb.ac.cn/biocode/tools/1/releases/${pkgver}/file/download?filename=${_pkgname}${pkgver}.zip")
    
      15sha256sums=('d566a3aba5888d98462388b7922a1bd6ca80959d377f1f862f0636690cf07f44')
    
      16
    
      17build() {
    
      18  cd "${_pkgname}${pkgver}/src" || exit
    
      19  make
    
      20}
    
      21
    
      22package() {
    
      23  cd "${_pkgname}${pkgver}/src"
    
      24  install -Dm755 ConPairs "$pkgdir"/usr/bin/ConPairs
    
      25  install -Dm755 AXTConvertor "$pkgdir"/usr/bin/AXTConvertor
    
      26  install -Dm755 KnKs "$pkgdir"/usr/bin/KnKs
    
      27  install -Dm755 KaKs "$pkgdir"/usr/bin/KaKs
    
      28}
    
      29

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 00:17:08	LOW	2
2026-07-18 00:14:48	LOW	2
2026-07-17 00:06:16	LOW	2
2026-07-16 00:05:41	LOW	2
2026-07-15 00:09:25	LOW	2