ksw2

LOW

maintainer imjiaoyuan 0 votes scanned 2026-10-08 16:09:18.783063

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

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Low Few votes, recently uploaded zero_votes_recent

Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

PKGBUILD

      1# Maintainer: imjiaoyuan <imjiaoyuan@gmail.com>
    
      2# Upstream tags nothing, so pkgver is the pinned commit's date and _tag carries
    
      3# the commit itself. The Makefile defaults to -march=native, hence sse2=1; the
    
      4# library is not built by any upstream target, so it is assembled here.
    
      5
    
      6pkgname=ksw2
    
      7_tag=289609bd9e5381a13b16239d0a7703f1ff03f9ca
    
      8pkgver=20230627
    
      9pkgrel=1
    
      10pkgdesc="Alignment library for DNA/RNA sequences under affine gap cost"
    
      11arch=('x86_64')
    
      12url="https://github.com/lh3/ksw2"
    
      13license=('MIT')
    
      14depends=('glibc')
    
      15source=("$pkgname-$pkgver.tar.gz::${url}/archive/${_tag}.tar.gz")
    
      16sha256sums=('b7bb4bdd246ac13ef4c94d3d8236b9805056dcaf4ddcbe34db85ab24eacf9ad2')
    
      17
    
      18build() {
    
      19    cd "$srcdir/$pkgname-$_tag"
    
      20    make sse2=1
    
      21    ar rcs libksw2.a ksw2_gg.o ksw2_gg2.o ksw2_gg2_sse.o ksw2_extz.o \
    
      22        ksw2_extz2_sse.o ksw2_extd.o ksw2_extd2_sse.o ksw2_extf2_sse.o \
    
      23        ksw2_exts2_sse.o kalloc.o
    
      24}
    
      25
    
      26package() {
    
      27    cd "$srcdir/$pkgname-$_tag"
    
      28    install -Dm644 ksw2.h "$pkgdir/usr/include/$pkgname/ksw2.h"
    
      29    install -Dm644 kalloc.h "$pkgdir/usr/include/$pkgname/kalloc.h"
    
      30    install -Dm644 libksw2.a "$pkgdir/usr/lib/libksw2.a"
    
      31    install -Dm644 LICENSE.txt "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
    
      32}
    
      33

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Scanned at (UTC)	Severity	Rules
2026-10-08 16:09:18	Low	1