paml-bin

maintainer imjiaoyuan · 0 votes · scanned 2026-08-18 00:03:42.021799

LOW

Why flagged The package uses a prebuilt binary from the project's official GitHub releases, which is dynamically linked but only depends on glibc; the source is verifiable and matches the project's own release infrastructure, making it a normal AUR package despite few votes and recent upload.

Triggered rules

LOW Few votes, recently uploaded zero_votes_recent

Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

LOW AI review llm_review

An AI model (qwen/qwen3-235b-a22b-2507) reviewed this and agrees it is LOW (confidence 95%): The package uses a prebuilt binary from the project's official GitHub releases, which is dynamically linked but only depends on glibc; the source is verifiable and matches the project's own release infrastructure, making it a normal AUR package despite few votes and recent upload.

PKGBUILD

      1# Maintainer: imjiaoyuan <imjiaoyuan@gmail.com>
    
      2
    
      3pkgname=paml-bin
    
      4_pkgname=paml
    
      5pkgver=4.10.10
    
      6pkgrel=1
    
      7pkgdesc="Phylogenetic analysis by maximum likelihood"
    
      8arch=('x86_64')
    
      9url="https://github.com/abacus-gene/paml"
    
      10license=('GPL-3.0-or-later')
    
      11depends=('glibc')
    
      12provides=("paml=${pkgver}")
    
      13conflicts=('paml')
    
      14options=('!strip' '!debug')
    
      15source=("${url}/releases/download/v${pkgver}/paml-${pkgver}-linux-x86_64.tar.gz")
    
      16sha256sums=('c164971eba80df95bf59bb95dec50046b492b03fa9c0d9860b6c35f23417308a')
    
      17
    
      18# Upstream prebuilt binaries are dynamically linked against glibc only (ldd:
    
      19# libc, libm). The release tarball bundles LICENSE, doc/, and Technical/.
    
      20# Mirrors the source `paml` package's file set (bin + doc + Technical + LICENSE);
    
      21# dat/examples/src are intentionally not packaged.
    
      22
    
      23package() {
    
      24    cd "$srcdir/paml-${pkgver}-linux-x86_64"
    
      25    install -Dm755 -t "$pkgdir/usr/bin" bin/*
    
      26    install -d "$pkgdir/usr/share/${_pkgname}"
    
      27    cp -r doc Technical "$pkgdir/usr/share/${_pkgname}/"
    
      28    install -Dm644 LICENSE "$pkgdir/usr/share/licenses/${pkgname}/LICENSE"
    
      29}
    
      30

Changes since previous scan

--- PKGBUILD @ 2026-08-17 00:18
+++ PKGBUILD @ 2026-08-18 00:03
@@ -4,7 +4,7 @@
 _pkgname=paml
 pkgver=4.10.10
 pkgrel=1
-pkgdesc="Phylogenetic analysis by maximum likelihood (precompiled binary) https://doi.org/10.1093/molbev/msm088"
+pkgdesc="Phylogenetic analysis by maximum likelihood"
 arch=('x86_64')
 url="https://github.com/abacus-gene/paml"
 license=('GPL-3.0-or-later')

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-18 00:03:42	LOW	2
2026-08-17 15:36:47	LOW	2
2026-08-17 00:18:29	LOW	2
2026-08-16 00:03:42	LOW	2
2026-08-15 15:30:38	LOW	2
2026-08-15 00:26:13	LOW	2
2026-08-14 00:03:41	LOW	2
2026-08-13 00:17:07	LOW	2
2026-08-12 09:23:17	LOW	2