phyde

maintainer malacology · 0 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The package downloads a JAR file from the project's official domain, which is not on a standard code host but plausibly the project's own; building and installing the project's own source from its official site is normal AUR practice, even with a non-whitelisted host.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-07-25) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The package downloads a JAR file from the project's official domain, which is not on a standard code host but plausibly the project's own; building and installing the project's own source from its official site is normal AUR practice, even with a non-whitelisted host.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:9 source=("http://www.phyde.de/PhyDE-1.jar.zip" "phyde")

PKGBUILD

1 offending line(s) highlighted

      1pkgname=phyde
    
      2pkgver=0.9971
    
      3pkgrel=2
    
      4pkgdesc="a system-independent editor for DNA and amino acid sequence alignments, designed to assist anybody interested in phylogenetic or other comparative analyses of sequence data"
    
      5arch=('any')
    
      6url="http://www.phyde.de/"
    
      7license=('custom')
    
      8depends=('java-environment')
    
      9source=("http://www.phyde.de/PhyDE-1.jar.zip" "phyde")
    
      10sha256sums=('697929e0bfd2d90a0f430a9e7f7c072c3996bc62748facb252ef40edfedad9b1'
    
      11            'e8e741fe77cc12f2440c02ee4cb44ff3c5b906e19d494b94c96656a10fdf29d2')
    
      12
    
      13package(){
    
      14	install -Dm 755 PhyDE-1.jar $pkgdir/usr/share/$pkgname/$pkgname.jar
    
      15	install -Dm 755 $pkgname $pkgdir/usr/bin/$pkgname
    
      16}
    
      17

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 00:17:08	LOW	2
2026-07-18 00:14:48	LOW	2
2026-07-17 00:06:16	LOW	2
2026-07-16 00:05:41	LOW	2
2026-07-15 00:09:25	LOW	2