pre-pe

LOW

maintainer imjiaoyuan 0 votes scanned 2026-10-08 16:09:18.783063

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

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Uploaded within the last 14 days with 2 or fewer community votes — little peer review so far.

PKGBUILD

      1# Maintainer: imjiaoyuan <imjiaoyuan@gmail.com>
    
      2# Upstream tags nothing, so pkgver is the pinned commit's date and _tag carries
    
      3# the commit itself. Upstream ships no LICENSE file; the licence text in the
    
      4# tree is the MIT grant heading the bundled klib headers, so that is installed.
    
      5
    
      6pkgname=pre-pe
    
      7_tag=1c54605ff078e7ed11708a271827a14b0ce2b3ff
    
      8pkgver=20180628
    
      9pkgrel=1
    
      10pkgdesc="Preprocessing of paired-end reads from experiment-specific protocols"
    
      11arch=('x86_64')
    
      12url="https://github.com/lh3/pre-pe"
    
      13license=('MIT')
    
      14depends=('glibc' 'zlib')
    
      15source=("$pkgname-$pkgver.tar.gz::${url}/archive/${_tag}.tar.gz")
    
      16sha256sums=('8c5e10c061866a7109a407de28b968d18e6708e8d9033642599d4948fa03dacc')
    
      17
    
      18build() {
    
      19    cd "$srcdir/$pkgname-$_tag"
    
      20    make
    
      21}
    
      22
    
      23package() {
    
      24    cd "$srcdir/$pkgname-$_tag"
    
      25    install -Dm755 pre-adna "$pkgdir/usr/bin/pre-adna"
    
      26    install -Dm755 pre-lianti "$pkgdir/usr/bin/pre-lianti"
    
      27    install -Dm755 pre-dip-c "$pkgdir/usr/bin/pre-dip-c"
    
      28    install -Dm755 pre-meta "$pkgdir/usr/bin/pre-meta"
    
      29    install -d "$pkgdir/usr/share/licenses/$pkgname"
    
      30    awk 'NR==1,/^\*\//' kseq.h > "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
    
      31}
    
      32

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Scanned at (UTC)	Severity	Rules
2026-10-08 16:09:18	Low	1