python-prody

maintainer orphaned · 0 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The package builds from a source tarball hosted on GitHub, which is the project's official repository; the flagged pattern is administrative (recently orphaned and re-adopted), but the build process is transparent and uses verifiable upstream source code.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-2507) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The package builds from a source tarball hosted on GitHub, which is the project's official repository; the flagged pattern is administrative (recently orphaned and re-adopted), but the build process is transparent and uses verifiable upstream source code.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM Recently orphaned & re-adopted orphaned_readopted

This package was orphaned and re-adopted within the last 30 days — a window where ownership transfers can introduce malicious changes.

PKGBUILD

      1# Maintainer: Mia Evans <contact@nelyah.eu>
    
      2
    
      3pkgname=python-prody
    
      4pkgver=1.10.10
    
      5pkgrel=2
    
      6pkgdesc='For protein structural dynamics analysis.'
    
      7arch=('any')
    
      8url='http://prody.csb.pitt.edu/'
    
      9license=('MIT')
    
      10# Only either one of the python version is required
    
      11depends=('python>=3.4' 'python2>=2.7' 'python-numpy>=1.10' 'python-biopython' 'python-scipy')
    
      12source=("https://github.com/prody/prody/archive/v${pkgver}.tar.gz")
    
      13md5sums=('2c862e4320b57a083072ec7f95ac4790')
    
      14
    
      15prepare(){
    
      16    tar xzf v$pkgver.tar.gz
    
      17}
    
      18
    
      19build() {
    
      20    cd ProDy-$pkgver
    
      21    python setup.py build
    
      22}
    
      23
    
      24package(){
    
      25    cd $srcdir/ProDy-$pkgver
    
      26    python setup.py install --root=${pkgdir} --optimize=1
    
      27}
    
      28

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 23:12:22	MEDIUM	1
2026-06-18 16:11:54	CLEAN	0