seaview

maintainer malacology · 11 votes · scanned 2026-08-03 00:08:14.047287

LOW

Why flagged The source is a tarball from the project's official host (doua.prabi.fr), which is plausibly project-owned despite not being on a standard whitelist; the package builds from source and installs only binaries and data files, with no evidence of malicious behavior.

Triggered rules

LOW AI review downgraded a static finding llm_review

The static rules flagged this MEDIUM, but an AI model (qwen/qwen3-235b-a22b-07-25) reviewed the full PKGBUILD and judged it LOW (confidence 95%): The source is a tarball from the project's official host (doua.prabi.fr), which is plausibly project-owned despite not being on a standard whitelist; the package builds from source and installs only binaries and data files, with no evidence of malicious behavior.

1 higher static finding superseded - not the current verdict (shown for transparency)

MEDIUM source=() URL on a non-standard host source_untrusted_domain

One or more source=() URLs point to a host outside the trusted allowlist (github.com, gitlab.com, codeberg.org, pypi.org, …).

PKGBUILD:19 source=("https://doua.prabi.fr/software/seaview_data/seaview.tar.gz"

PKGBUILD

1 offending line(s) highlighted

      1# Maintainer: Guoyi Zhang <myname at malacology dot net>
    
      2# Contributor: Steffen Weber <-boenki-gmx-de->
    
      3# Contributor: Nick B <Shirakawasuna at gmail _dot_com>
    
      4
    
      5pkgname=seaview
    
      6pkgver=5.1
    
      7pkgrel=1
    
      8pkgdesc="GUI for multiple sequence alignment and molecular phylogeny. https://doi.org/10.1093/molbev/msp259"
    
      9arch=('x86_64')
    
      10url="http://doua.prabi.fr/software/seaview"
    
      11license=('GPL3')
    
      12depends=('fltk')
    
      13makedepends=('make' 'gcc' 'fltk')
    
      14optdepends=('clustal-omega'
    
      15            'muscle'
    
      16	    'gblocks'
    
      17	    'phyml'
    
      18	    'bionj')
    
      19source=("https://doua.prabi.fr/software/seaview_data/seaview.tar.gz"
    
      20        'seaview.desktop'
    
      21        'seaview.png')
    
      22md5sums=('57853e73a4e99b15fc1c1b8d50869d76'
    
      23         'e4cfc6d76819c5cd8e68ac93c2121557'
    
      24         '337583df60b24d724d96e511a3f063ce')
    
      25build(){
    
      26  cd $pkgname
    
      27  make
    
      28}
    
      29
    
      30package() {
    
      31  install -Dm 755 "$srcdir"/$pkgname/$pkgname "$pkgdir"/usr/bin/$pkgname
    
      32  install -Dm 644 seaview.desktop $pkgdir/usr/share/applications/seaview.desktop
    
      33  install -Dm 755 "$srcdir"/seaview.png $pkgdir/usr/share/seaview/seaview.png
    
      34}
    
      35

Scan history

Scanned at (UTC)	Severity	Rules
2026-08-03 00:08:14	LOW	2
2026-08-02 00:16:08	LOW	2
2026-08-01 00:11:18	LOW	2
2026-07-31 00:14:10	LOW	2
2026-07-30 00:17:23	LOW	2
2026-07-29 00:25:53	LOW	2
2026-07-28 00:07:28	LOW	2
2026-07-27 00:24:32	LOW	2
2026-07-26 00:07:32	LOW	2
2026-07-25 00:13:44	LOW	2
2026-07-24 00:02:28	LOW	2
2026-07-23 00:14:47	LOW	2
2026-07-22 00:29:32	LOW	2
2026-07-21 00:24:15	LOW	2
2026-07-20 00:19:49	LOW	2
2026-07-19 00:17:08	LOW	2
2026-07-18 00:14:48	LOW	2
2026-07-17 00:06:16	LOW	2
2026-07-16 00:05:41	LOW	2
2026-07-15 00:09:25	LOW	2